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From Swimming with Seagrasses to Statistics

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Somewhere down the road ecology evolved from this: To something like this: As a member of the Seagrass Ecosystem Research lab here at Florida International University I am, by default, a researcher in two long-term monitoring projects.  The first is the FCE-LTER seagrass monitoring project and the other is a seagrass monitoring project in the Florida Keys National Marine Sanctuary .  Both datasets have resulted in mounds and mounds of data throughout the years.  As a side project to my dissertation I arrogantly decided to conquer said data mounds and turn out some ground-breaking revelations about benthic community structure in South Florida.  There's just one problem:  I am buried in MOUNDS of data!  To analyze these data, it turned out, would be much more complicated than just getting the R code ( R is a stats program that hates me, but it's free so I put up with the abuse!) correct so the program will tell me what I want to know.  Here is the first...